CDS
| Accession Number | TCMCG035C38245 |
| gbkey | CDS |
| Protein Id | XP_021597289.1 |
| Location | complement(join(26526396..26526455,26526894..26527059,26527579..26527724,26529893..26530118,26530431..26530653,26530865..26531013,26531412..26531515,26535859..26535930,26536016..26536090,26544260..26544403,26544531..26544618,26544725..26544920,26545642..26545870,26546309..26546383,26546641..26546776,26546861..26547017,26547119..26547431)) |
| Gene | LOC110603720 |
| GeneID | 110603720 |
| Organism | Manihot esculenta |
Protein
| Length | 852aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA394209 |
| db_source | XM_021741597.1 |
| Definition | probable RNA-dependent RNA polymerase 5 isoform X2 [Manihot esculenta] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGCTGATGCTCATCAGCTGCCTCCTTCTGTAGAGCAACTCATAGCTAAAATATGTACTGATCAGAACCAACCACCACTCGGACTCCCGGCTCGCCGAGTGCTTGCTTCACTGGAGGAAGAAGTGGTTCTCGAGATTCTTTGTACAATAGCCAGTTCTGAAATTAGGAAATCTTTTGACGGTTTTGTATTTTACTTGGTTAAACAGAAGGTAGGTAATAGTTCCCCTGTTAAACGCCTTTGTTTGTCTCCGACTTCGCCGCAACAGTCGAGTCGCAGCTCCGCACCTGCGTGGTTGATGATGCACCAGCAATGTGAATCTATTTTTGAATCCCCGATATCGATGTCCCTATCCAGGGATACTAGCTGTAGCTCAGAAGCAGTGAGCAGAACCGAAATTAGTCCACAGCTGCAGGCATTGGGTGAACTCGAATTCAGAAAGGCATTTCTTATATTGAGTTATATGGGCAGCTATAAGCTGGAGGAAGTGATATCTGCGGATAAGATTCGAGCGATGGGACATTTGCCGATGGATAAATTTGAGGCTGAAGTTTGGAAAGCTGTGGGCAATAGATGTGGGTATATCAAGGAGAATGAACGCGTGAAGTATCTTGTCTGGGATTGTGGAAAAACACACATTTACCACTGCCATGTTAGTTCGGGCGGAACTTATAGGTTCAAGGGACCTTATCTAACCACGATGAGCAATTTCCTACAAAGGGTGTTAGGGGATGATAATGTTCTAATGGTGAAATTTGGAAAAGAGGATGCTGACAAGAGGTGTTCAACAAGTAGTCCAGTCGATTATTATGCTAAGTGTTCAACAAGTAGTTCAGTCGACTATTATGCTAAGTATGGCAGCTTAGCTAGAGAAGGGATTGTCGTTGGTTTACGCCGATACCGCTTTTTTGTGTTTAAAGATGGTGGCAAAGAAGAAAAGAAGAAAAACCCAACCACTTCACCTGTTAAATGCTTCTTTGTTCGCACAGAGTCTGATGCTTTTAAGGACAGTCGAGATTATATTTTGCATGGAAAAACAATTCGTGAAGCTAGATCTATATTTATGGATGTAGATAAATTGCCTAGTTTATCCAACTGTATGGCTAGATTCTCTCTTATTTTGTCAAAGACTGTGAACTTAGAAGTTAACTTATCAAGTGTGAAGATAGAGAAAATAGATGATATACCATGCCTGGATAATGATGGTAACATTGTCAAAGGCAAGGATGGAAAACTTTTAATACATACGGATGGAACTGGTTTTATATCAGAGGATTTGGCTTTAAAATGCCCAAGGAGAGTGCAAAAGGGAAAGTGCATTGATGCCAATGAAATGGAGAGACTGCTTGATTGTAATGAGCTCATGGGGAAATCTTCAGAAGTGAAATTTCCAGAATCTAATTCTGGGGAACCGCCTTTGCTGATTCAGTTCCGCCTTTTCCACAATGGTGGTGCTGTCAAAGGAACTCTCCTTGTCAATAAGAAGCTCTGTCCCGGAACCATTCAAGTCCGACCCTCAATGATTAAAGTTGAGCCAGATTCAGTGCAAAATGCTTGCACAAAAAATTCATTTGAGATAGTTGGAACCAGCAATCGGCCAAAGGGAGCATATCTTTCGAGGAACTTAATTGCACTTCTTAGCTATGGTGGGGTTCCAAAAGAGTTTTTTATGGATTTACTGAATAATGCTTTAGAAGATGCACAAGGTGCCCTCTCAAAAAAGCATGTAGCTTTGCGAGTGGCCATTAGCAATGGAGAGATGGATAATTTTACTGTGGCAAGAATGCTATTTTCTGGAATTCCCTTGGATGAATCACATATTCAGTACCATCAGCTTGTATTGATGAGGGAGGAGAAGAAGAGTCTTAAAGGGGGACGTATACCCGTCCCTGAATCATATTATTTGATGGGGACTGTTGATCCCACTGGAACCCTAGAGGCTGATGAAGTTTGTATAATCTTGGATAATGGGCAGGTTTCAGGGAAAGTACTGGTGTATCGAAATCCTGGTTTACATTTTGGAGATATACATATTTTGAAGGCGACATATGTGGAGGGCATAGAAGATTTTGTAGGAAATGCAAAATATGCTATATTATTCCCTTGTAAAGGACCACGCTCATTGGCAGATAAGATGGCAGGAGGTGACTATGATGGTGACATGTATTTTGTGTCAAGAAATCCTGAGCTGGTAGAGAAGTTCAATCAGAGTGAACCTTGGAATCCTCCCTTTTCTAGCAGTAATGTGCCTAATAAGAAACCTAGTGATTTTTCTGATGAGGAATTAGAAGACGAGTTGTTCAGACTGTTTCTGATGACTAGATTTCAGCCAAGTTACACTATGGGTGTGGCAGCTGATAGTTGGTTGGCAATAATGGATAGGCTTCTGATATTGGGAGATGACAGAAATGATGAGAGAAATAACATGAAGAGGAACATGTTAGACTTAATTGATAAATACTATGATGCTCTTGATGCACCAAAGAAAGGGGGGGAAAAGTGCATTGAAGTCAATATGAAAAGGCATGTGGTGAAGCTTTTAGCTTATGGAGACTTGTAA |
| Protein: MADAHQLPPSVEQLIAKICTDQNQPPLGLPARRVLASLEEEVVLEILCTIASSEIRKSFDGFVFYLVKQKVGNSSPVKRLCLSPTSPQQSSRSSAPAWLMMHQQCESIFESPISMSLSRDTSCSSEAVSRTEISPQLQALGELEFRKAFLILSYMGSYKLEEVISADKIRAMGHLPMDKFEAEVWKAVGNRCGYIKENERVKYLVWDCGKTHIYHCHVSSGGTYRFKGPYLTTMSNFLQRVLGDDNVLMVKFGKEDADKRCSTSSPVDYYAKCSTSSSVDYYAKYGSLAREGIVVGLRRYRFFVFKDGGKEEKKKNPTTSPVKCFFVRTESDAFKDSRDYILHGKTIREARSIFMDVDKLPSLSNCMARFSLILSKTVNLEVNLSSVKIEKIDDIPCLDNDGNIVKGKDGKLLIHTDGTGFISEDLALKCPRRVQKGKCIDANEMERLLDCNELMGKSSEVKFPESNSGEPPLLIQFRLFHNGGAVKGTLLVNKKLCPGTIQVRPSMIKVEPDSVQNACTKNSFEIVGTSNRPKGAYLSRNLIALLSYGGVPKEFFMDLLNNALEDAQGALSKKHVALRVAISNGEMDNFTVARMLFSGIPLDESHIQYHQLVLMREEKKSLKGGRIPVPESYYLMGTVDPTGTLEADEVCIILDNGQVSGKVLVYRNPGLHFGDIHILKATYVEGIEDFVGNAKYAILFPCKGPRSLADKMAGGDYDGDMYFVSRNPELVEKFNQSEPWNPPFSSSNVPNKKPSDFSDEELEDELFRLFLMTRFQPSYTMGVAADSWLAIMDRLLILGDDRNDERNNMKRNMLDLIDKYYDALDAPKKGGEKCIEVNMKRHVVKLLAYGDL |